Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX468299: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-316371' containing sample 'Staphylococcus aureus W85807'
1 ILLUMINA (Illumina HiSeq 2000) run: 4.5M spots, 908.2M bases, 515Mb downloads

UUID: ad64a40f-0d2c-49b6-a56f-f4c94967a1b1

Design: Illumina sequencing of Staphylococcus aureus W85807 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227895 • SRP037005 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus W85807

SAMN02403205 • SRS555356 • All experiments • All runs

Organism: Staphylococcus aureus W85807

Library:

Name: Pond-316371

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 464519.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5BIPS

material_type: DNA:DNA Somatic

product_order: PDO-2547

product_part_number: P-WG-0004

project: G54668

research_project: RP-509

root_sample_id: SM-4T112

sample_id: SM-5BIPS

work_request: 39320

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 4.5M spots, 908.2M bases, 515Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165965	4,495,899	908.2M	515Mb	2014-02-09

ID:: 648487

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